National Cheng Kung University

Faculty
  1. Home
  2. Faculty
  3. Full-time teachers
  4. Chung-I Li
Full-time teachers
Name Chung-I Li
Job title Associate Professor
Expertise Industrial Statistics, Statistical Computing, Bioinformatics, Statistical Consulting
E-mail cili@ncku.edu.tw
Office Room 62323, 3th Floor, Department of Statistics
Tel (06)2757575~53620
Web site https://researchoutput.ncku.edu.tw/en/persons/chung-i-li
Main Experiences
  • Associate Professor, Department of Statistics, National Cheng Kung University.(2019 February–Present)
  • Assistant Professor, Department of Statistics, National Cheng Kung University.(2015 August-2019 January)
  • Project-Appointed Assistant Professor, Department of Applied Mathematics, National Chiayi University.(2013 August-2015 July)
  • Postdoctoral Research Fellow, Center for Quantitative Sciences, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.(2010 September-2013 July)
  • Project-Appointed Assistant Professor, Department of Applied Mathematics, National Chiayi University.(2009 August-2010 July)
  • Postdoctoral Research Fellow, National Cheng Kung University.(2008 December-2009 July)
Education
  • Ph.D. Department of Statistics, National Cheng Kung University(2008)
  • M.S. Department of Statistics, National Cheng Kung University(2001)
  • B.S. Department of Statistics, Fu Jen Catholic University(1999)
Research Field
  • Industrial Statistics
  • Statistical Computing
  • Bioinformatics
  • Statistical Consulting
Journals
  1. 3-MCPD and glycidol coexposure induces systemic toxicity and synergistic nephrotoxicity via NLRP3 inflammasome activation, necroptosis, and autophagic cell death
    Liu, P. W., Li, C. I., Huang, K. C., Liu, C. S., Chen, H. L., Lee, C. C., Chiou, Y. Y. & Chen, R. J., 2021 三月 5, 於: Journal of Hazardous Materials. 405, 124241.
  2. A Simplified Diagnostic Classification Scheme of Chemotherapy-Induced Peripheral Neuropathy
    Huang, H. W., Wu, P. Y., Su, P. F., Li, C. I., Yeh, Y. M., Lin, P. C., Hsu, K. F., Shen, M. R., Chang, J. Y. & Lin, C. C. K., 2020, 於: Disease Markers. 2020, 3402108.
  3. A new demerit control chart for monitoring the quality of multivariate Poisson processes
    Li, C. I., Pan, J. N. & Huang, M. H., 2019, 於 : Journal of Applied Statistics. 46, 4, p. 1-20
  4. Detecting the process changes for multivariate nonlinear profile data
    Pan, J-N., Li, C-I. & Lu, M. Z., 2019 十月 1, 於 : Quality and Reliability Engineering International. 35, 6, p. 1890-1910 21 p.
  5. Linear profiles monitoring in the presence of nonnormal random errors
    Li, C. I. & Tsai, T. R., 2019 十二月 1, 於 : Quality and Reliability Engineering International. 35, 8, p. 2579-2592 14 p.
  6. Monitoring nonlinear profile data using support vector regression method
    Li, C. I., Pan, J. N. & Liao, C. H., 2019 二月 1, 於 : Quality and Reliability Engineering International. 35, 1, p. 127-135 9 p.
  7. Monitoring the Process Quality for Multistage Systems Using New Mixed EWMA-CUSUM Control Chart
    Pan, J-N., Li, C-I. & Yang, J-R., 2019 九月, 於 : Journal of the Chinese Statistical Association. 57
  8. Control charts based on quasi-likelihood estimation for monitoring profiles
    Li, C. I., 2018 二月 11, 於 : Journal of Statistical Computation and Simulation. 88, 3, p. 457-470 14 p.
  9. Monitoring the process quality for multistage systems with multiple characteristics
    Pan, J. N., Li, C. I. & Hsu, J. W., 2018 一月 1, 於 : International Journal of Quality and Reliability Management. 35, 1, p. 50-63 14 p.
  10. RnaSeqSampleSize: Real data based sample size estimation for RNA sequencing
    Zhao, S., Li, C. I., Guo, Y., Sheng, Q. & Shyr, Y., 2018 五月 30, 於 : BMC Bioinformatics. 19, 1, 191.
  11. Bivariate Poisson models with varying offsets: An application to the paired mitochondrial DNA dataset
    Su, P. F., Mau, Y. L., Guo, Y., Li, C. I., Liu, Q., Boice, J. D. & Shyr, Y., 2017 三月 1, 於 : Statistical Applications in Genetics and Molecular Biology. 16, 1, p. 47-58 12 p.
  12. Identification of active miRNA promoters from nuclear run-on RNA sequencing
    Liu, Q., Wang, J., Zhao, Y., Li, C. I., Stengel, K. R., Acharya, P., Johnston, G., Hiebert, S. W. & Shyr, Y., 2017 七月 1, 於 : Nucleic acids research. 45, 13, e121.
  13. Power and sample size calculations for high-throughput sequencing-based experiments
    Li, C-I., Samuels, D. C., Zhao, Y. Y., Shyr, Y. & Guo, Y., 2017 五月 30, 於 : Briefings in bioinformatics. 19, 6, p. 1247-1255 9 p.
  14. A new approach to detecting the process changes for multistage systems
    Pan, J. N., Li, C. I. & Wu, J. J., 2016 十一月 15, 於 : Expert Systems With Applications. 62, p. 293-301 9 p.
  15. Diverse, biologically relevant, and targetable gene rearrangements in triple-negative breast cancer and other malignancies
    Shaver, T. M., Lehmann, B. D., Beeler, J. S., Li, C. I., Li, Z., Jin, H., Stricker, T. P., Shyr, Y. & Pietenpol, J. A., 2016 八月 15, 於 : Cancer Research. 76, 16, p. 4850-4860 11 p.
  16. New multivariate process capability indices for measuring the performance of multivariate processes subject to non-normal distributions
    Pan, J. N., Li, C. I. & Shih, W. C., 2016 一月 4, 於 : International Journal of Quality and Reliability Management. 33, 1, p. 42-61 20 p.
  17. Practicability of detecting somatic point mutation from RNA high throughput sequencing data
    Sheng, Q., Zhao, S., Li, C. I., Shyr, Y. & Guo, Y., 2016 五月 1, 於 : Genomics. 107, 5, p. 163-169 7 p.
  18. Sample size calculation based on generalized linear models for differential expression analysis in RNA-seq data
    Li, C. I. & Shyr, Y., 2016 十二月 1, 於 : Statistical Applications in Genetics and Molecular Biology. 15, 6, p. 491-505 15 p.
  19. Determining the optimal allocation of parameters for multivariate measurement system analysis
    Pan, J-N., Li, C-I. & Ou, S. C., 2015 六月 4, 於 : Expert Systems With Applications. 42, 20, p. 7036-7045 10 p.
  20. Transfer RNA detection by small RNA deep sequencing and disease association with myelodysplastic syndromes
    Guo, Y., Bosompem, A., Mohan, S., Erdogan, B., Ye, F., Vickers, K. C., Sheng, Q., Zhao, S., Li, C. I., Su, P. F., Jagasia, M., Strickland, S. A., Griffiths, E. A. & Kim, A. S., 2015 九月 24, 於 : BMC genomics. 16, 1, 727.
  21. Dose to the inferior pharyngeal constrictor predicts prolonged gastrostomy tube dependence with concurrent intensity-modulated radiation therapy and chemotherapy for locally-advanced head and neck cancer
    Vlacich, G., Spratt, D. E., Diaz, R., Phillips, J. G., Crass, J., Li, C. I., Shyr, Y. & Cmelak, A. J., 2014 三月, 於 : Radiotherapy and Oncology. 110, 3, p. 435-440 6 p.
  22. Evaluating environmental performance using new process capability indices for autocorrelated data
    Pan, J. N., Li, C. I. & Chen, F. Y., 2014 十月 1, 於 : Environmental Monitoring and Assessment. 186, 10, p. 6369-6384 16 p.
  23. New capability indices for measuring the performance of a multidimensional machining process
    Pan, J-N. & Li, C-I., 2014 四月 1, 於 : Expert Systems With Applications. 41, 5, p. 2409-2414 6 p.
  24. Oligoclonal CD8+ T cells play a critical role in the development of hypertension
    Trott, D. W., Thabet, S. R., Kirabo, A., Saleh, M. A., Itani, H., Norlander, A. E., Wu, J., Goldstein, A., Arendshorst, W. J., Madhur, M. S., Chen, W., Li, C. I., Shyr, Y. & Harrison, D. G., 2014 十一月 1, 於 : Hypertension. 64, 5, p. 1108-1115 8 p.
  25. Phase II study of bendamustine in relapsed chemotherapy sensitive or resistant small-cell lung cancer
    Lammers, P. E., Shyr, Y., Li, C. I., Hutchison, A. S., Sandler, A., Carbone, D. P., Johnson, D. H., Keedy, V. L. & Horn, L., 2014 四月, 於 : Journal of Thoracic Oncology. 9, 4, p. 559-562 4 p.
  26. Phase II trial of sorafenib and erlotinib in advanced pancreatic cancer
    Cardin, D. B., Goff, L., Li, C. I., Shyr, Y., Winkler, C., DeVore, R., Schlabach, L., Holloway, M., McClanahan, P., Meyer, K., Grigorieva, J., Berlin, J. & Chan, E., 2014 六月 1, 於 : Cancer medicine. 3, 3, p. 572-579 8 p.
  27. RNAseqPS: A web tool for estimating sample size and power for RNAseq experiment
    Guo, Y., Zhao, S., Li, C. I., Sheng, Q. & Shyr, Y., 2014 十月 13, 於 : Cancer Informatics. 13, p. 1-5 5 p.
  28. Sample size determination for paired right-censored data based on the difference of Kaplan-Meier estimates
    Su, P. F., Li, C. I. & Shyr, Y., 2014 六月 1, 於 : Computational Statistics and Data Analysis. 74, p. 39-51 13 p.
  29. Statistical strategies for microRNAseq batch effect reduction
    Guo, Y., Zhao, S., Su, P-F., Li, C-I., Ye, F., Flynn, C. R. & Shyr, Y., 2014 六月 1, 於 : Translational Cancer Research. 3, 3, p. 260-265 6 p.
  30. The design of and R control charts for skew normal distributed data
    Li, C-I., Su, N. C., Su, P-F. & Shyr, Y., 2014 十二月 2, 於 : Communications in Statistics - Theory and Methods. 43, 23, p. 4908-4924 17 p.
  31. An evaluation of allele frequency estimation accuracy using pooled sequencing data
    Guo, Y., Cai, Q., Li, C., Li, J., Li, C. I., Courtney, R., Zheng, W. & Long, J., 2013 十月 10, 於 : International Journal of Computational Biology and Drug Design. 6, 4, p. 279-293 15 p.
  32. Evaluation of allele frequency estimation using pooled sequencing data simulation
    Guo, Y., Samuels, D. C., Li, J., Clark, T., Li, C. I. & Shyr, Y., 2013 三月 7, 於 : The Scientific World Journal. 2013, 895496.
  33. Evaluation of read count based RNAseq analysis methods
    Guo, Y., Li, C. I., Ye, F. & Shyr, Y., 2013 十二月 9, 於 : BMC genomics. 14, SUPP 8, S2.
  34. MitoSeek: extracting mitochondria information and performing high-throughput mitochondria sequencing analysis.
    Guo, Y., Li, J., Li, C. I., Shyr, Y. & Samuels, D. C., 2013 五月 1, 於 : Unknown Journal. 29, 9, p. 1210-1211 2 p.
  35. Sample size calculation based on exact test for assessing differential expression analysis in RNA-seq data
    Li, C. I., Su, P. F. & Shyr, Y., 2013 十二月 6, 於 : BMC Bioinformatics. 14, 1, 357.
  36. Sample size calculation for differential expression analysis of RNA-seq data under Poisson distribution
    Li, C-I., Su, P-F., Guo, Y. & Shyr, Y., 2013 十月 10, 於 : International Journal of Computational Biology and Drug Design. 6, 4, p. 358-375 18 p.
  37. Very Low-Level Heteroplasmy mtDNA Variations Are Inherited in Humans
    Guo, Y., Li, C. I., Sheng, Q., Winther, J. F., Cai, Q., Boice, J. D. & Shyr, Y., 2013 十二月 20, 於 : Journal of Genetics and Genomics. 40, 12, p. 607-615 9 p.
  38. Exome sequencing generates high quality data in non-target regions
    Guo, Y., Long, J., He, J., Li, C. I., Cai, Q., Shu, X. O., Zheng, W. & Li, C., 2012 五月 20, 於 : BMC genomics. 13, 1, 194.
  39. Sample size determination for estimating multivariate process capability indices based on lower confidence limits
    Li, C. I. & Pan, J. N., 2012 九月 1, 於 : Journal of Applied Statistics. 39, 9, p. 1911-1920 10 p.
  40. The effect of strand bias in Illumina short-read sequencing data
    Guo, Y., Li, J., Li, C. I., Long, J., Samuels, D. C. & Shyr, Y., 2012 十一月 24, 於 : BMC genomics. 13, 1, 666.
  41. The use of next generation sequencing technology to study the effect of radiation therapy on mitochondrial DNA mutation
    Guo, Y., Cai, Q., Samuels, D. C., Ye, F., Long, J., Li, C. I., Winther, J. F., Tawn, E. J., Stovall, M., Lähteenmäki, P., Malila, N., Levy, S., Shaffer, C., Shyr, Y., Shu, X. O. & Boice, J. D., 2012 五月 15, 於 : Mutation Research - Genetic Toxicology and Environmental Mutagenesis. 744, 2, p. 154-160 7 p.
  42. Analyzing survival curves at a fixed point in time for paired and clustered right-censored data
    Su, P. F., Chi, Y., Li, C. I., Shyr, Y. & Liao, Y. D., 2011 四月 1, 於 : Computational Statistics and Data Analysis. 55, 4, p. 1617-1628 12 p.
Back